Map file

Input file

This file has one line with genome information for each locus. The file should include all loci present in other files. Each line of a map file has three values, the chromosome number, the locus name, and the physical position (in base-pairs). Only loci on one chromosome should be provided!

Example with four SNP loci on chromosome 1:

1 snp_a 12483939
1 snp_b 192152913
1 snp_c 65429279
1 snp_d 107421759

The input file for hybrid method, seg_map_file, has the same format as the above. It should include only the subsets of the loci that have been chosen to run the single peeling stage of the hybrid peeling.