File formats

Table of Contents

• Data file formats
  • Pedigree file
  • Genotype file
  • Dosage file
  • Sequence allele read counts file
  • Haplotype file
  • Phenotype file
  • Genotype probability file
  • Phased genotype probabilities file
  • Binary Plink file
  • Map file
  • Segregation file
  • Phenotype probability file
• Parameter file formats
  • Alternative allele probability file
  • Genotype error probability file
  • Sequence error probability file
  • Phenotype penetrance probability file